T3 Wheat Sandbox

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What's New

Breeders Datafarm Data

The Wheat Breeders Datafarm has been retired. Each of the 884 phenotype trials have been copied across to T3/Wheat.

Data Analysis Tools

BLAST Search updated to NCBI BLAST 2.6 and the latest wheat assemblies

GWAS Results updated to include Wheat Expression Browser: expVIP.

Wheat CAP exome capture data

Genotype data is now available for all of the parents of the bi-parental families being used for fine mapping of yield component QTL in the Wheat CAP project.

Trait freeze injury

Phenotypes name	freeze injury
Alternate name	FreezeInj
Description	Severity of plant injury caused by low temperature; no injury= 0, maximum injury= 3.
TO number	CO_321:0000127
Datatype	numeric
Max pheno value	3
Min pheno value	0
Updated on	2016-10-31 07:47:47

Phenotype Categories

Phenotype Category Name
Abiotic stress	View

Units

Unit Name
0-3	View

Available Datasets for this Phenotype

Year	Trial Name	Traits
2014	SW-AMPanel_2014_Imperial_Dry	fertile spikelets per head,freeze injury,grain weight per head,grain yield,heading date,maturity date (physiological),Normalized Difference Vegetation Index,Normalized water index 3,plant height,plot shattering,seeds per head,single kernel weight,spike number,spike shattering,spikelets per head,sterile spikelets per head
2014	SW-AMPanel_2014_Imperial_Irr	fertile spikelets per head,flag leaf angle,flag leaf glaucousness,freeze injury,grain weight per head,grain yield,head wax,heading date,maturity date (physiological),Normalized Difference Vegetation Index,Normalized water index 3,peduncle glaucousness,plant height,plot shattering,seeds per head,single kernel weight,spike number,spike shattering,spikelets per head,sterile spikelets per head

In 2009 the Toronto International Data Release Workshop agreed on a policy statement about prepublication data sharing. Accordingly, the data producers are making many of the datasets in T3 available prior to publication of a global analysis. Guidelines for appropriate sharing of these data are given in the excerpt from the Toronto Statement

I agree to the Data Usage Policy as specified in Toronto Statement.