Contact Us

  T3 Wheat Sandbox

Genotyping data by experiment

Trial Codeexperiment nameplatformlinesmarkersgenotype data
TAM_PilotWinterPlate2USWHEATS_POPA1GoldenGate3884832,224
UCD_PilotSpringPlate2USWHEATS_POPA1GoldenGate3084825,440
OKS_PilotWinterPlate2USWHEATS_POPA1GoldenGate28481,696
CSU_PilotWinterPlate2USWHEATS_POPA1GoldenGate2784822,896
UMN_PilotSpringPlate1USWHEATS_POPA1GoldenGate2684822,048
NEB_PilotWinterPlate1USWHEATS_POPA1GoldenGate3884832,224
WES_PilotSpringPlate3USWHEATS_POPA1GoldenGate1884815,264
SDK_PilotWinterPlate1USWHEATS_POPA1GoldenGate1784814,416
NEB_PilotWinterPlate3USWHEATS_POPA1GoldenGate68485,088
WAS_PilotSpringPlate2USWHEATS_POPA1GoldenGate108488,480
UIA_PilotSpringPlate2USWHEATS_POPA1GoldenGate3084825,440
NEB_PilotWinterPlate2USWHEATS_POPA1GoldenGate48483,392
MSU_PilotWinterPlate3USWHEATS_POPA1GoldenGate2084816,960
OKS_PilotWinterPlate1USWHEATS_POPA1GoldenGate3684830,528
CSU_PilotWinterPlate3USWHEATS_POPA1GoldenGate38482,544
SDK_PilotSpringPlate1USWHEATS_POPA1GoldenGate4084833,920
WES_PilotSpringPlate2USWHEATS_POPA1GoldenGate1284810,176
CNL_PilotWinterPlate3CNL_POPA1GoldenGate108488,480
MSU_PilotSpringPlate1USWHEATS_POPA1GoldenGate3084825,440
CMT_PilotSpringPlate3USWHEATS_POPA1GoldenGate3184826,288
MSU_PilotWinterPlate2USWHEATS_POPA1GoldenGate1484811,872
KSM_PilotWinterPlate3USWHEATS_POPA1GoldenGate48483,392
WES_PilotWinterPlate1USWHEATS_POPA1GoldenGate48483,392
SDK_PilotWinterPlate3USWHEATS_POPA1GoldenGate28481,696
WES_PilotWinterPlate2USWHEATS_POPA1GoldenGate78485,936
UMN_PilotSpringPlate2USWHEATS_POPA1GoldenGate1484811,872
SDK_PilotWinterPlate2USWHEATS_POPA1GoldenGate38482,544
OKS_PilotWinterPlate3USWHEATS_POPA1GoldenGate28481,696
NSGCwheat9K_4XNSGCwheat9K_4XInfinium 9K54665383,569,748
NSGCwheat9K_winter_facNSGCwheat9K_winter_facInfinium 9K167456349,431,316
NSGCwheat9K_springNSGCwheat9K_springInfinium 9K2196563412,372,264
TCAP90K_LeafRustPanelLRpanelInfinium 90K3393413711,572,443
TCAP90K_SWWpanelSWWpanelInfinium 90K3173413810,821,746
TCAP90K_NAMparents_panelNAMparents_panelInfinium 90K61341382,082,418
TCAP90K_SpringAM_panelSpringAMpanelInfinium 90K249341378,500,113
NebDuplicates_DArTs_2010NebDuplicates_2010DArT2781980550,440
WorldwideDiversityPanel_9KWorldwideDiversityPanel_9KInfinium 9K2259630514,242,995
SynOP_GBS_2012AntMapMN_BOPA1GBS restriction site1641485243,540
SynOP_GBS_2012BinMapMN_BOPA1GBS restriction site162197533,199,986
HWWAMP_GBS_2014HWWAMP_GBSGBS restriction site3031243334376,730,202
CornellMaster_2013_GBSCornell MasterGBS restriction site11284806954,221,832
HWWAMP_2013_GBSHWWAMP_2013_GBSGBS restriction site2885817216,753,536
2014_TCAP_ABB_SRW_MidSRWW_GBSGBS restriction site36410284437,435,216
2014_TCAP_ABB_SRW_SthSRWW_GBSGBS restriction site48310332449,905,492
2014_SRWW_YNVPSRWW_GBSGBS restriction site30511230734,253,635
2012_SRWW_ElitePanelSRWW_GBSGBS restriction site2769323125,731,756
2014_HapMap_GBSHapMapGBS restriction site5820976412,166,312
2014_HapMap_WECHapMapsequence capture3671341162492,206,454
VRND4_UCD_2015VRND4_2015Infinium 90K80163711,309,680
TCAP90K_CSRVAL14CSRV90KInfinium 90K120215552,586,600
TCAP90K_HWWAMP_SRPN14SRPN90KInfinium 90K2021555431,100
TCAP90K_YQV14YQV90KInfinium 90K220215554,742,100
TCAP90K_HWWAMPHWWAMP90KInfinium 90K299215556,444,945
2017_WheatCAPWheatCapsequence capture3697655835,156,088
2017_WheatCAP_UCDWheatCapsequence capture60104357662,614,560
2018_WheatCAPWheatCAPsequence capture125968047,161,648
2019_WheatCAP_RegulatoryWheatCAP-Regsequence capture37163011860,314,366
total1,357,157,875

In 2009 the Toronto International Data Release Workshop agreed on a policy statement about prepublication data sharing. Accordingly, the data producers are making many of the datasets in T3 available prior to publication of a global analysis. Guidelines for appropriate sharing of these data are given in the excerpt from the Toronto Statement

I agree to the Data Usage Policy as specified in Toronto Statement.