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  T3 Barley Sandbox

Genotyping data by experiment

Trial Codeexperiment nameplatformlinesmarkersgenotype data
2006BOPA1_AB_Plate5AB_Plate5GoldenGate951536145,920
2006BOPA1_BA_Plate7BA_Plate7GoldenGate961536147,456
2006BOPA1_MN_Plate3MN_Plate3GoldenGate961536147,456
2006BOPA1_MT_Plate10MT_Plate10GoldenGate961536147,456
2006BOPA1_N2_Plate8N2_Plate8GoldenGate961536147,456
2006BOPA1_N6_Plate9N6_Plate9GoldenGate961536147,456
2006BOPA1_OR_Plate2OR_Plate2GoldenGate961536147,456
2006BOPA1_VT_Plate1VT_Plate1GoldenGate961536147,456
2006BOPA1_WA_Plate4WA_Plate4GoldenGate961536147,456
2006BOPA2_AB_Plate5AB_Plate5GoldenGate941536144,384
2006BOPA2_BA_Plate7BA_Plate7GoldenGate961536147,456
2006BOPA2_MN_Plate3MN_Plate3GoldenGate961536147,456
2006BOPA2_MT_Plate10MT_Plate10GoldenGate961536147,456
2006BOPA2_N2_Plate8N2_Plate8GoldenGate961536147,456
2006BOPA2_N6_Plate9N6_Plate9GoldenGate961536147,456
2006BOPA2_VT_Plate1VT_Plate1GoldenGate961536147,456
2006BOPA2_WA_Plate4WA_Plate4GoldenGate961536147,456
2007BOPA1_AB_Plate5USDA-Aberdeen samplesGoldenGate961536147,456
2007BOPA1_UT_Plate6Utah State samplesGoldenGate961536147,456
2007BOPA1_BA_Plate7BARI samplesGoldenGate961536147,456
2007BOPA1_MN_Plate3U of Minnesota samplesGoldenGate961536147,456
2007BOPA1_MT_Plate102007 Montana State samplesGoldenGate961536147,456
2007BOPA1_N2_Plate8NDSU 2 row samplesGoldenGate961536147,456
2007BOPA1_N6_Plate9NDSU 6 row samplesGoldenGate961536147,456
2007BOPA1_OR_Plate2Oregon State samplesGoldenGate961536147,456
2007BOPA1_VT_Plate1Virgina Tech samplesGoldenGate921536141,312
2007BOPA1_WA_Plate4Washington State samplesGoldenGate961536147,456
2007BOPA2_AB_Plate5USDA-Aberdeen samplesGoldenGate961536147,456
2007BOPA2_UT_Plate6Utah State samplesGoldenGate961536147,456
2007BOPA2_BA_Plate7BARI samplesGoldenGate961536147,456
2007BOPA2_MN_Plate3U of Minnesota samplesGoldenGate961536147,456
2007BOPA2_MT_Plate10Montana State samplesGoldenGate961536147,456
2007BOPA2_N2_Plate8NDSU 2 row samplesGoldenGate961536147,456
2007BOPA2_N6_Plate9NDSU 6 row samplesGoldenGate961536147,456
2007BOPA2_OR_Plate2Oregon State samplesGoldenGate961536147,456
2007BOPA2_VT_Plate1Virginia Tech samplesGoldenGate921536141,312
2007BOPA2_WA_Plate4Washington State samplesGoldenGate961536147,456
2006BOPA2_OR_Plate2OR_Plate2GoldenGate961536147,456
POPA3_CAPcoreCC_POPA3_MappingGoldenGate961536147,456
POPA3_OWB_MappingOWB_POPA3GoldenGate961536147,456
POPA3_Steptoe-Morex_MappingSM_POPA3GoldenGate961536147,456
POPA3_Morex-Barke_MappingMB_POPA3GoldenGate961536147,456
POPA2_Morex-Barke_MappingMB_POPA2GoldenGate961536147,456
POPA2_CAPcoreCC_POPA2_MappingGoldenGate961536147,456
POPA2_OWB_MappingOWB_POPA2GoldenGate961536147,456
POPA2_Steptoe-Morex_MappingSM_All_POPA2GoldenGate1533072470,016
2008BOPA1_AB_Plate5AB_Plate5GoldenGate961536147,456
2008BOPA2_AB_Plate5AB_Plate5GoldenGate961536147,456
2008BOPA1_BA_Plate7BA_Plate7GoldenGate961536147,456
2008BOPA2_BA_Plate7BA_Plate7GoldenGate961536147,456
2008BOPA1_MN_Plate3MN_Plate3GoldenGate961536147,456
2008BOPA2_MN_Plate3MN_Plate3GoldenGate961536147,456
2008BOPA1_N2_Plate8N2_Plate8GoldenGate961536147,456
2008BOPA2_N2_Plate8N2_Plate8GoldenGate961536147,456
2008BOPA1_N6_Plate9N6_Plate9GoldenGate961536147,456
2008BOPA2_N6_Plate9N6_Plate9GoldenGate961536147,456
2008BOPA1_OR_Plate2OR_Plate2GoldenGate961536147,456
2008BOPA2_OR_Plate2OR_Plate2GoldenGate961536147,456
2008BOPA1_UT_Plate6UT_Plate6GoldenGate961536147,456
2008BOPA2_UT_Plate6UT_Plate6GoldenGate961536147,456
2008BOPA1_VT_Plate1VT_Plate1GoldenGate821536125,952
2008BOPA2_VT_Plate1VT_Plate1GoldenGate821536125,952
2008BOPA1_WA_Plate4WA_Plate4GoldenGate961536147,456
2008BOPA2_WA_Plate4WA_Plate4GoldenGate961536147,456
2008BOPA1_MT_Plate10MT_Plate10GoldenGate961536147,456
2008BOPA2_MT_Plate10MT_Plate10GoldenGate961536147,456
POPA1-2_CAPcoreCC_POPA1GoldenGate1041524158,496
POPA1_Morex-Barke_MappingMB_POPA1GoldenGate961524146,304
POPA1_Oregon_Wolf_Barley_MappingOWB_POPA1GoldenGate951524144,780
POPA1_Steptoe_Morex_MappingSM_POPA1GoldenGate1521524231,648
2006BOPA2_UT_Plate6UT_Plate6GoldenGate961536147,456
2009BOPA1_AB_Plate5AB_BOPA1GoldenGate961536147,456
2009BOPA1_BA_Plate7BA_BOPA1GoldenGate961536147,456
2009BOPA1_MN_Plate3MN_BOPA1GoldenGate963072294,912
2009BOPA1_MT_Plate10MT_BOPA1GoldenGate961536147,456
2009BOPA1_N2_Plate8N2_BOPA1GoldenGate961536147,456
2009BOPA1_N6_Plate9N6_BOPA1GoldenGate961536147,456
2009BOPA1_OR_Plate2OR_BOPA1GoldenGate963072294,912
2009BOPA1_UT_Plate6UT_BOPA1GoldenGate961536147,456
2009BOPA1_VT_Plate1VT_BOPA1GoldenGate921536141,312
2009BOPA1_WA_Plate4WA_BOPA1GoldenGate961536147,456
2009BOPA2_BA_Plate7BA_BOPA2GoldenGate961536147,456
2009BOPA2_MT_Plate10MT_BOPA2GoldenGate961536147,456
2009BOPA2_N2_Plate8N2_BOPA2GoldenGate961536147,456
2009BOPA2_N6_Plate9N6_BOPA2GoldenGate961536147,456
2009BOPA2_UT_Plate6UT_BOPA2GoldenGate961536147,456
2009BOPA2_VT_Plate1VT_BOPA2GoldenGate921536141,312
2009BOPA2_WA_Plate4WA_BOPA2GoldenGate961536147,456
2009BOPA2_AB_Plate5AB_BOPA2GoldenGate961536147,456
2011_9K_NB_allplatesBarleyNB_9KInfinium 9K2419691316,722,547
CAPV2011_MN_9KMN_9KInfinium 9K956684634,980
VC_FHB2010_384VC_FHB10VeraCode1896384728,064
2007BOPA1_MN_PRECAPMN_PRECAPGoldenGate2411454350,414
2010BOPA1_MN_GS_PARENTSMN_GSPARENTSGoldenGate1611536247,296
VC_MNSC2_2011_384VC_MNSC2VeraCode1920384737,280
VC_MNSC3_2012_384VC_MNSC3VeraCode1247383477,601
VC_MNWC1_2011_384VC_MNWC1VeraCode754383288,782
VC_MNWC2_2012_384VC_MNWC2VeraCode768384294,912
2011BOPA1_MN_WC0MN_GSWC0GoldenGate45153669,120
MorexBarke_GBS_2012MxB_GBSGBS restriction site91213851,946,035
VC_MNWC3_2013_384VC_MNWC3VeraCode287384110,208
Ethiopia_Eritrea_9KETH_ERI_9KInfinium 9K29867021,997,196
TCFW6_LTT_9KLTT_BOPAInfinium 9K76872035,531,904
VC_MNWC4_2013_384VC_MNWC4VeraCode768384294,912
WBIP_9K_ParentsWildParents9KInfinium 9K267308190,008
OWB_GBS_2012OWB_GBSGBS restriction site82343962,820,472
9K_MN_CAP6_20139K_MN_CAP6Infinium 9K19278641,509,888
9K_MN_GEN10_20139K_MN_GEN10Infinium 9K14678641,148,144
BOPA1_MN_WB_2011BOPA1_MN_WBInfinium 9K583072178,176
2006BOPA1_UT_Plate6UT_Plate6GoldenGate961536147,456
2014_NDSU_9K2014_NDSU_GENOInfinium 9K62866954,204,460
WBIP384_ABNAM_2012WBIP_384VeraCode822384315,648
WBIP384_HOUH_2013HOUH_384VeraCode21938484,096
2015N2PYT2015_NDSU_GENOInfinium 9K453363164,439
2016_HapMap_WECJH_HapMapexome capture2671167749311,788,983
2016N2PYTA2016_NDSU_PYTAInfinium 9K453430194,790
2016_N2_PYTBC2016NDSUPYTBCInfinium 9K30832198,868
2017_NDSU_Yuma_2R2017N2YUMAInfinium 9K25774761,226,652
2018_NDSU_Yuma_2R2018N2YUMAInfinium 9K2100462970,200
2016GBS_WBDCMNWBDC_GBSGBS restriction site3145084215,964,388
2015iSelect_MN_plate1iSelect_barley_11491263_A.bpmInfinium 9K937861731,073
2019N2YUMA2019_NDSU_Yuma_2RInfinium 9K2169457991,233
2015GBS_MNMN_GBS_S15GBS restriction site1467235216345,061,872
UMN_NSGC_GWASMN_GWASGBS restriction site7486960752,066,036
2018_CCRU_50KCCRU_50KInfinium 50K175440377,706,475
2020_NDSU_Eurofins2020NDSUInfinium 9K1695530898,350
total792,653,226

In 2009 the Toronto International Data Release Workshop agreed on a policy statement about prepublication data sharing. Accordingly, the data producers are making many of the datasets in T3 available prior to publication of a global analysis. Guidelines for appropriate sharing of these data are given in the excerpt from the Toronto Statement

I agree to the Data Usage Policy as specified in Toronto Statement.