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  T3 Barley Sandbox

Genotyping experiment WBIP384_HOUH_2013

Description

Experiment Short NameHOUH_384
PlatformVeraCode
Data ProgramUSDA-ARS Raleigh, NC (NCG)
Breeding ProgramUniversity of Minnesota Genomics (UMG)
OPA NameWBIP384
Processing Date8/14/2013
SoftwareIllumina Genome Studio
Software version2010.3
Comments

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384 markers were assayed for 219 lines.
(lines and markers)

Removed by filteringRemaining
219 markers have a minor allele frequency (MAF) less than 5%
6 markers are missing more than 10% of data
221 markers removed
163 markers

Maximum Missing Data: %     Minimum MAF: %    



Additional files available

Samples (germplasm lines)
Manifest (markers used)VC0013453-OPA.opa
Cluster File
Raw data

In 2009 the Toronto International Data Release Workshop agreed on a policy statement about prepublication data sharing. Accordingly, the data producers are making many of the datasets in T3 available prior to publication of a global analysis. Guidelines for appropriate sharing of these data are given in the excerpt from the Toronto Statement

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