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  T3 Barley Sandbox

Genotyping experiment VC_MNWC1_2011_384


Experiment Short NameVC_MNWC1
Data ProgramUSDA-ARS Fargo, ND (NDG)
Breeding ProgramUniversity of Minnesota - Agronomy (MN)
OPA NameLTT_384_VC
Processing Date10/8/2011
SoftwareIllumina Genome Studio
Software version2010.3


383 markers were assayed for 754 lines.
(lines and markers)

Removed by filteringRemaining
21 markers have a minor allele frequency (MAF) less than 5%
12 markers are missing more than 10% of data
26 markers removed
357 markers

Maximum Missing Data: %     Minimum MAF: %    

Additional files available

Samples (germplasm lines)MNS11001-MNS11008_SampleSheets.csv
Manifest (markers used)
Cluster File
Raw data

In 2009 the Toronto International Data Release Workshop agreed on a policy statement about prepublication data sharing. Accordingly, the data producers are making many of the datasets in T3 available prior to publication of a global analysis. Guidelines for appropriate sharing of these data are given in the excerpt from the Toronto Statement

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