Genotyping experiment VC_MNSC2_2011_384
Description
| Experiment Short Name | VC_MNSC2 |
| Platform | VeraCode |
| Data Program | USDA-ARS Fargo, ND (NDG) |
| Breeding Program | University of Minnesota - Agronomy (MN) |
| OPA Name | FHB_384_VC |
| Processing Date | 9/30/2011 |
| Software | Illumina Genome Studio |
| Software version | 2010.3 |
| Comments | MN Spring Barley Genomic Selection Cycle 2 with Custom 384 SNP Veracode assay (Spring VC assay #1) |
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384 markers were assayed for 1920 lines.| Removed by filtering | Remaining |
| 30 markers have a minor allele frequency (MAF) less than 5%
7 markers are missing more than 10% of data 30 markers removed | 354 markers |
Maximum Missing Data: %
Minimum MAF: %
Additional files available
| Samples (germplasm lines) | MNS2011VC_001-020.csv |
| Manifest (markers used) | VC0013194-OPA |
| Cluster File | unknown |
| Raw data |