Genotyping experiment POPA1_Steptoe_Morex_Mapping
Description
| Experiment Short Name | SM_POPA1 |
| Platform | GoldenGate |
| Data Program | UC Riverside Close Lab (UCR) |
| Breeding Program | Mapping: Steptoe-Morex (SM) |
| OPA Name | POPA1-1 |
| Processing Date | 2006 |
| Software | Illumina GenomeStudio |
| Software version | 2010.3 |
| Comments |
Download
1524 markers were assayed for 152 lines.| Removed by filtering | Remaining |
| 1089 markers have a minor allele frequency (MAF) less than 5%
149 markers are missing more than 10% of data 1089 markers removed | 435 markers |
Maximum Missing Data: %
Minimum MAF: %
Additional files available
| Samples (germplasm lines) | pilot_opa1_master_sample sheet.csv |
| Manifest (markers used) | GS0006616-OPA1.opa |
| Cluster File | Pilot_OPA1_BS_061127_070420_080317.EGT |
| Raw data | POPA1-1_SM_1353887_1353879_1519091015.zip |