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  T3 Barley Sandbox

Genotyping experiment OWB_GBS_2012

Description

Experiment Short NameOWB_GBS
PlatformGBS restriction site
Data ProgramKansas State / USDA Genotyping Lab (KSG)
Breeding ProgramMapping: Oregon Wolfe Barley (OWB)
OPA Namen/a
Processing Date9/1/2011
Softwarecustom Java script
Software versionn/a
CommentsSee PLoS One e32253

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34396 markers were assayed for 82 lines.
(lines and markers)

Removed by filteringRemaining
0 markers have a minor allele frequency (MAF) less than 5%
26008 markers are missing more than 10% of data
26008 markers removed
8388 markers

Maximum Missing Data: %     Minimum MAF: %    



Additional files available

Samples (germplasm lines)
Manifest (markers used)
Cluster File
Raw data

In 2009 the Toronto International Data Release Workshop agreed on a policy statement about prepublication data sharing. Accordingly, the data producers are making many of the datasets in T3 available prior to publication of a global analysis. Guidelines for appropriate sharing of these data are given in the excerpt from the Toronto Statement

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