Contact Us

  T3 Barley Sandbox

Genotyping experiment 9K_MN_CAP6_2013

Description

Experiment Short Name9K_MN_CAP6
PlatformInfinium 9K
Data ProgramUSDA-ARS Fargo, ND (NDG)
Breeding ProgramUniversity of Minnesota - Agronomy (MN)
OPA Namen/a
Processing Date5/14/2013
SoftwareIllumina Genome Studio
Software version2010.3
Comments

Download

7864 markers were assayed for 192 lines.
(lines and markers)

Removed by filteringRemaining
3511 markers have a minor allele frequency (MAF) less than 5%
421 markers are missing more than 10% of data
3538 markers removed
4326 markers

Maximum Missing Data: %     Minimum MAF: %    



Additional files available

Samples (germplasm lines)
Manifest (markers used)iSelect_barley_11491263_A.bpm
Cluster FileTCAPbarley9K_080811.egt
Raw data

In 2009 the Toronto International Data Release Workshop agreed on a policy statement about prepublication data sharing. Accordingly, the data producers are making many of the datasets in T3 available prior to publication of a global analysis. Guidelines for appropriate sharing of these data are given in the excerpt from the Toronto Statement

I agree to the Data Usage Policy as specified in Toronto Statement.