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  T3 Barley Sandbox

Genotyping experiment 2015iSelect_MN_plate1


Experiment Short NameiSelect_barley_11491263_A.bpm
PlatformInfinium 9K
Data ProgramUSDA-ARS Fargo, ND (NDG)
Breeding ProgramUniversity of Minnesota - Agronomy (MN)
OPA Namenone
Processing Date8/7/2015
SoftwareIllumina GSGT
Software version1.9.4


7861 markers were assayed for 93 lines.
(lines and markers)

Removed by filteringRemaining
4945 markers have a minor allele frequency (MAF) less than 5%
987 markers are missing more than 10% of data
4995 markers removed
2866 markers

Maximum Missing Data: %     Minimum MAF: %    

Additional files available

Samples (germplasm lines)
Manifest (markers used)
Cluster File
Raw data

In 2009 the Toronto International Data Release Workshop agreed on a policy statement about prepublication data sharing. Accordingly, the data producers are making many of the datasets in T3 available prior to publication of a global analysis. Guidelines for appropriate sharing of these data are given in the excerpt from the Toronto Statement

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