Contact Us

  T3 Barley Sandbox

Genotyping experiment 2008BOPA1_UT_Plate6


Experiment Short NameUT_Plate6
Data ProgramUSDA-ARS Fargo, ND (NDG)
Breeding ProgramUtah State (UT)
Processing Date8/9/2008
SoftwareIllumina GenomeStudio
Software version2010.3


1536 markers were assayed for 96 lines.
(lines and markers)

Removed by filteringRemaining
462 markers have a minor allele frequency (MAF) less than 5%
133 markers are missing more than 10% of data
473 markers removed
1063 markers

Maximum Missing Data: %     Minimum MAF: %    

Additional files available

Samples (germplasm lines)Sample_Sheet_2008plate1-10BOPA1.csv
Manifest (markers used)GS0007511-OPA.opa
Cluster FileBOPA1PooledSamples2009.EGT

In 2009 the Toronto International Data Release Workshop agreed on a policy statement about prepublication data sharing. Accordingly, the data producers are making many of the datasets in T3 available prior to publication of a global analysis. Guidelines for appropriate sharing of these data are given in the excerpt from the Toronto Statement

I agree to the Data Usage Policy as specified in Toronto Statement.