Genotyping experiment 2007BOPA1_MN_PRECAP
Description
| Experiment Short Name | MN_PRECAP |
| Platform | GoldenGate |
| Data Program | USDA-ARS Fargo, ND (NDG) |
| Breeding Program | University of Minnesota - Agronomy (MN) |
| OPA Name | BOPA1 |
| Processing Date | 12/18/2007 |
| Software | Illumina Genome Studio |
| Software version | unknown |
| Comments | MN breeding program yield trial lines from the pre-Barley CAP years 2003-2005; BOPA1 SNP assay |
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1454 markers were assayed for 241 lines.| Removed by filtering | Remaining |
| 725 markers have a minor allele frequency (MAF) less than 5%
0 markers are missing more than 10% of data 725 markers removed | 729 markers |
Maximum Missing Data: %
Minimum MAF: %
Additional files available
| Samples (germplasm lines) | Sample_Sheet_OPA1Kevin.csv |
| Manifest (markers used) | GS0007511-OPA.opa |
| Cluster File | BOPA1revJan2010.EGT |
| Raw data |