Genotyping experiment 2006BOPA1_UT_Plate6
Description
| Experiment Short Name | UT_Plate6 |
| Platform | GoldenGate |
| Data Program | USDA-ARS Fargo, ND (NDG) |
| Breeding Program | Utah State (UT) |
| OPA Name | BOPA1 |
| Processing Date | 1/27/10 |
| Software | Illumina Genome Studio |
| Software version | 2010.3 |
| Comments | This is a re-collection of data performed in 2010 after the original data collected was determined to be of poor quality. |
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1536 markers were assayed for 96 lines.| Removed by filtering | Remaining |
| 431 markers have a minor allele frequency (MAF) less than 5%
131 markers are missing more than 10% of data 441 markers removed | 1095 markers |
Maximum Missing Data: %
Minimum MAF: %
Additional files available
| Samples (germplasm lines) | Sample_Sheet_2006plate6USU.csv |
| Manifest (markers used) | GS0007511-OPA.opa |
| Cluster File | 2006OPA1plate6_113007clusterfeb08.EGT |
| Raw data |